BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G05SP1|AL425754
(752 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig389 1485 0.0
>3x_Contig389
Length = 2629
Score = 1485 bits (748), Expect = 0.0
Identities = 750/752 (99%)
Strand = Plus / Plus
Query: 1 gatctttaattcgtaagtwtctttattctttttctccacatagtcttctagttctttgaa 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 gatctttaattcgtaagtttctttattctttttctccacatagtcttctagttctttgaa 1210
Query: 61 gtgtttgaggaaaacaccagggaaactggtgccccaatatgcaccttccagtgacagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 gtgtttgaggaaaacaccagggaaactggtgccccaatatgcaccttccagtgacagatg 1270
Query: 121 acggctcgattgtkggatgtacaaatcctggcaacttggacagtaaagccttaccgtttg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 acggctcgattgtgggatgtacaaatcctggcaacttggacagtaaagccttaccgtttg 1330
Query: 181 cttccccaacgtatcacttaatccgcatggaagcaattggatgcttccacaatgataccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 cttccccaacgtatcacttaatccgcatggaagcaattggatgcttccacaatgataccg 1390
Query: 241 tgggcaagttccgaattccttacgatcgaacttctcggccattgcctgcaagccggcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 tgggcaagttccgaattccttacgatcgaacttctcggccattgcctgcaagccggcctt 1450
Query: 301 tgttaggataaatctagcatgtattagtccgtatagttgttctgctgaatgttctacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 tgttaggataaatctagcatgtattagtccgtatagttgttctgctgaatgttctacaat 1510
Query: 361 tgatctagtaacatgtgcatcattatcttttttagaattcgaactggcatcgtttttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 tgatctagtaacatgtgcatcattatcttttttagaattcgaactggcatcgtttttctc 1570
Query: 421 ctcttcttcatccgacgtagattccaaatctagtattgtatccaatgctttcctataata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 ctcttcttcatccgacgtagattccaaatctagtattgtatccaatgctttcctataata 1630
Query: 481 tgctacttcttgagaaagacctgttaaattgaaatcatcttcgataaaatcagtaggtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 tgctacttcttgagaaagacctgttaaattgaaatcatcttcgataaaatcagtaggtac 1690
Query: 541 ttgacagaaatattcgtgtccgaatcttgaacagaatgtaggaatccattcctcgtaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 ttgacagaaatattcgtgtccgaatcttgaacagaatgtaggaatccattcctcgtaatt 1750
Query: 601 accactatcgctcgagtcgttcgagggttctataaatgacattagtatgggggtgtgtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1751 accactatcgctcgagtcgttcgagggttctataaatgacattagtatgggggtgtgtgt 1810
Query: 661 gtgaatatctcaaacaatcgtttgattttgaaattgaacaaacagattatctgatgagta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1811 gtgaatatctcaaacaatcgtttgattttgaaattgaacaaacagattatctgatgagta 1870
Query: 721 gtgaaagctatcttcctagagtttgaagttga 752
||||||||||||||||||||||||||||||||
Sbjct: 1871 gtgaaagctatcttcctagagtttgaagttga 1902
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5951
Number of Sequences: 1807
Number of extensions: 5951
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 752
length of database: 10,358,551
effective HSP length: 16
effective length of query: 736
effective length of database: 10,329,639
effective search space: 7602614304
effective search space used: 7602614304
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)